Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Gm8410-201ENSMUST00000117225 605 ntBASIC16.68■□□□□ 0.26
Cln3Q61124 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.68■□□□□ 0.26
Cln3Q61124 Gm23547-201ENSMUST00000158210 271 ntBASIC16.68■□□□□ 0.26
Cln3Q61124 Gm5745-201ENSMUST00000183748 313 ntBASIC16.68■□□□□ 0.26
Cln3Q61124 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.68■□□□□ 0.26
Cln3Q61124 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.68■□□□□ 0.26
Cln3Q61124 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cln3Q61124 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cln3Q61124 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cln3Q61124 Gm13453-201ENSMUST00000118708 357 ntBASIC16.67■□□□□ 0.26
Cln3Q61124 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.67■□□□□ 0.26
Cln3Q61124 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cln3Q61124 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.67■□□□□ 0.26
Cln3Q61124 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.67■□□□□ 0.26
Cln3Q61124 Gm28630-201ENSMUST00000187806 498 ntBASIC16.67■□□□□ 0.26
Cln3Q61124 Gm18766-201ENSMUST00000189811 808 ntBASIC16.67■□□□□ 0.26
Cln3Q61124 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cln3Q61124 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cln3Q61124 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
Cln3Q61124 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cln3Q61124 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.67■□□□□ 0.26
Cln3Q61124 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cln3Q61124 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.66■□□□□ 0.26
Cln3Q61124 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.66■□□□□ 0.26
Cln3Q61124 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.66■□□□□ 0.26
Cln3Q61124 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Gm5866-201ENSMUST00000177881 973 ntBASIC16.66■□□□□ 0.26
Cln3Q61124 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.66■□□□□ 0.26
Cln3Q61124 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cln3Q61124 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln3Q61124 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.65■□□□□ 0.26
Cln3Q61124 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cln3Q61124 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.65■□□□□ 0.26
Cln3Q61124 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 Gm18049-201ENSMUST00000208909 581 ntBASIC16.65■□□□□ 0.26
Cln3Q61124 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.65■□□□□ 0.26
Cln3Q61124 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln3Q61124 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cln3Q61124 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cln3Q61124 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cln3Q61124 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Cln3Q61124 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.64■□□□□ 0.25
Cln3Q61124 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln3Q61124 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms