Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Gm10253-201ENSMUST00000194270 940 ntBASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-2Q5R1I4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Gm22175-201ENSMUST00000175007 78 ntBASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Trav6-2Q5R1I4 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Gm11543-201ENSMUST00000120758 370 ntBASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms