Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.17■□□□□ 0.5
SfswapQ3USH5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Gm13365-201ENSMUST00000121188 973 ntBASIC18.17■□□□□ 0.5
SfswapQ3USH5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Gm20553-201ENSMUST00000204205 844 ntBASIC18.17■□□□□ 0.5
SfswapQ3USH5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
SfswapQ3USH5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Gm11745-201ENSMUST00000121669 448 ntBASIC18.16■□□□□ 0.5
SfswapQ3USH5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Gm11025-201ENSMUST00000140773 466 ntBASIC18.16■□□□□ 0.5
SfswapQ3USH5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.16■□□□□ 0.5
SfswapQ3USH5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SfswapQ3USH5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SfswapQ3USH5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.15■□□□□ 0.5
SfswapQ3USH5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SfswapQ3USH5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SfswapQ3USH5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SfswapQ3USH5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SfswapQ3USH5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SfswapQ3USH5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.14■□□□□ 0.49
SfswapQ3USH5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfswapQ3USH5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfswapQ3USH5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms