Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3U1D9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Gm25925-201ENSMUST00000158314 306 ntBASIC13.26□□□□□ -0.29
Q3U1D9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Gm27494-201ENSMUST00000184735 189 ntBASIC13.26□□□□□ -0.29
Q3U1D9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.26□□□□□ -0.29
Q3U1D9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Q3U1D9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3U1D9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.25□□□□□ -0.29
Q3U1D9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.25□□□□□ -0.29
Q3U1D9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.25□□□□□ -0.29
Q3U1D9 Gm45747-201ENSMUST00000212203 999 ntBASIC13.25□□□□□ -0.29
Q3U1D9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.25□□□□□ -0.29
Q3U1D9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.25□□□□□ -0.29
Q3U1D9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.25□□□□□ -0.29
Q3U1D9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3U1D9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Q3U1D9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Q3U1D9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Q3U1D9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.24□□□□□ -0.29
Q3U1D9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.24□□□□□ -0.29
Q3U1D9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.24□□□□□ -0.29
Q3U1D9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.24□□□□□ -0.29
Q3U1D9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.24□□□□□ -0.29
Q3U1D9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.24□□□□□ -0.29
Q3U1D9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Q3U1D9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Q3U1D9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3U1D9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.23□□□□□ -0.29
Q3U1D9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.23□□□□□ -0.29
Q3U1D9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.23□□□□□ -0.29
Q3U1D9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.23□□□□□ -0.29
Q3U1D9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3U1D9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Q3U1D9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.23□□□□□ -0.29
Q3U1D9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.23□□□□□ -0.29
Q3U1D9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.23□□□□□ -0.29
Q3U1D9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms