Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.87□□□□□ -0.03
Msx2Q03358 Gm45058-201ENSMUST00000205810 766 ntBASIC14.87□□□□□ -0.03
Msx2Q03358 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx2Q03358 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.87□□□□□ -0.03
Msx2Q03358 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.86□□□□□ -0.03
Msx2Q03358 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msx2Q03358 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.86□□□□□ -0.03
Msx2Q03358 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Msx2Q03358 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msx2Q03358 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.86□□□□□ -0.03
Msx2Q03358 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.86□□□□□ -0.03
Msx2Q03358 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.86□□□□□ -0.03
Msx2Q03358 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.86□□□□□ -0.03
Msx2Q03358 Gm21559-201ENSMUST00000220638 855 ntBASIC14.86□□□□□ -0.03
Msx2Q03358 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Gm8587-201ENSMUST00000076538 843 ntBASIC14.86□□□□□ -0.03
Msx2Q03358 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Msx2Q03358 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.86□□□□□ -0.03
Msx2Q03358 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx2Q03358 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.85□□□□□ -0.03
Msx2Q03358 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.85□□□□□ -0.03
Msx2Q03358 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.85□□□□□ -0.03
Msx2Q03358 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Msx2Q03358 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Gm27389-201ENSMUST00000183622 195 ntBASIC14.85□□□□□ -0.03
Msx2Q03358 Gm18959-201ENSMUST00000208954 655 ntBASIC14.85□□□□□ -0.03
Msx2Q03358 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.85□□□□□ -0.03
Msx2Q03358 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msx2Q03358 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.85□□□□□ -0.03
Msx2Q03358 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx2Q03358 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Msx2Q03358 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msx2Q03358 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.84□□□□□ -0.03
Msx2Q03358 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.84□□□□□ -0.03
Msx2Q03358 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.84□□□□□ -0.03
Msx2Q03358 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.84□□□□□ -0.03
Msx2Q03358 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Msx2Q03358 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.84□□□□□ -0.03
Msx2Q03358 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Msx2Q03358 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.84□□□□□ -0.03
Msx2Q03358 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx2Q03358 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx2Q03358 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx2Q03358 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx2Q03358 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Msx2Q03358 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx2Q03358 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx2Q03358 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms