Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.45□□□□□ -0.1
Nkx3-2P97503 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx3-2P97503 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx3-2P97503 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx3-2P97503 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.44□□□□□ -0.1
Nkx3-2P97503 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.44□□□□□ -0.1
Nkx3-2P97503 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.44□□□□□ -0.1
Nkx3-2P97503 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.44□□□□□ -0.1
Nkx3-2P97503 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx3-2P97503 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx3-2P97503 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.42□□□□□ -0.1
Nkx3-2P97503 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Gm9682-201ENSMUST00000197505 556 ntBASIC14.42□□□□□ -0.1
Nkx3-2P97503 Gm7787-201ENSMUST00000216858 688 ntBASIC14.42□□□□□ -0.1
Nkx3-2P97503 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx3-2P97503 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms