Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.84□□□□□ -0.35
SgcaP82350 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.84□□□□□ -0.35
SgcaP82350 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.84□□□□□ -0.35
SgcaP82350 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SgcaP82350 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SgcaP82350 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SgcaP82350 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SgcaP82350 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
SgcaP82350 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.83□□□□□ -0.36
SgcaP82350 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcaP82350 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.83□□□□□ -0.36
SgcaP82350 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.82□□□□□ -0.36
SgcaP82350 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.82□□□□□ -0.36
SgcaP82350 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.82□□□□□ -0.36
SgcaP82350 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.82□□□□□ -0.36
SgcaP82350 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.82□□□□□ -0.36
SgcaP82350 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SgcaP82350 Gm10566-201ENSMUST00000086739 996 ntBASIC12.82□□□□□ -0.36
SgcaP82350 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SgcaP82350 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SgcaP82350 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcaP82350 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgcaP82350 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgcaP82350 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.81□□□□□ -0.36
SgcaP82350 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.81□□□□□ -0.36
SgcaP82350 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.81□□□□□ -0.36
SgcaP82350 Gm7213-201ENSMUST00000215977 950 ntBASIC12.81□□□□□ -0.36
SgcaP82350 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms