Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.24■□□□□ 0.03
Ldb1P70662 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ldb1P70662 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.24■□□□□ 0.03
Ldb1P70662 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ldb1P70662 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ldb1P70662 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ldb1P70662 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.24■□□□□ 0.03
Ldb1P70662 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.23■□□□□ 0.03
Ldb1P70662 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.23■□□□□ 0.03
Ldb1P70662 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.23■□□□□ 0.03
Ldb1P70662 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ldb1P70662 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.23■□□□□ 0.03
Ldb1P70662 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.23■□□□□ 0.03
Ldb1P70662 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.23■□□□□ 0.03
Ldb1P70662 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.23■□□□□ 0.03
Ldb1P70662 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ldb1P70662 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ldb1P70662 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ldb1P70662 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ldb1P70662 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ldb1P70662 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
Ldb1P70662 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.22■□□□□ 0.03
Ldb1P70662 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Gm25990-201ENSMUST00000102440 86 ntBASIC15.22■□□□□ 0.03
Ldb1P70662 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ldb1P70662 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ldb1P70662 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Ldb1P70662 Gm6089-201ENSMUST00000197666 938 ntBASIC15.22■□□□□ 0.03
Ldb1P70662 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.22■□□□□ 0.03
Ldb1P70662 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.22■□□□□ 0.03
Ldb1P70662 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.22■□□□□ 0.03
Ldb1P70662 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ldb1P70662 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ldb1P70662 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ldb1P70662 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Gm7153-201ENSMUST00000117092 455 ntBASIC15.21■□□□□ 0.03
Ldb1P70662 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.21■□□□□ 0.03
Ldb1P70662 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ldb1P70662 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.21■□□□□ 0.03
Ldb1P70662 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Ldb1P70662 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ldb1P70662 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.21■□□□□ 0.03
Ldb1P70662 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.21■□□□□ 0.03
Ldb1P70662 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ldb1P70662 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ldb1P70662 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ldb1P70662 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ldb1P70662 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ldb1P70662 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ldb1P70662 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ldb1P70662 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ldb1P70662 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.2■□□□□ 0.02
Ldb1P70662 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ldb1P70662 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ldb1P70662 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms