Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Gm12008-201ENSMUST00000117791 755 ntBASIC9.02□□□□□ -0.97
Rps28P62858 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rps28P62858 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Rps28P62858 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rps28P62858 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rps28P62858 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Rps28P62858 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rps28P62858 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC9.01□□□□□ -0.97
Rps28P62858 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Rps28P62858 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.01□□□□□ -0.97
Rps28P62858 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC9.01□□□□□ -0.97
Rps28P62858 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.01□□□□□ -0.97
Rps28P62858 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.01□□□□□ -0.97
Rps28P62858 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.01□□□□□ -0.97
Rps28P62858 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rps28P62858 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Rps28P62858 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.01□□□□□ -0.97
Rps28P62858 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rps28P62858 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rps28P62858 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms