Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.93□□□□□ -0.66
Cks1bP61025 Efs-202ENSMUST00000227037 2540 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.92□□□□□ -0.66
Cks1bP61025 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.92□□□□□ -0.66
Cks1bP61025 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.92□□□□□ -0.66
Cks1bP61025 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.92□□□□□ -0.66
Cks1bP61025 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.92□□□□□ -0.66
Cks1bP61025 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cks1bP61025 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.92□□□□□ -0.66
Cks1bP61025 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cks1bP61025 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Cks1bP61025 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.92□□□□□ -0.66
Cks1bP61025 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cks1bP61025 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1bP61025 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1bP61025 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cks1bP61025 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cks1bP61025 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.91□□□□□ -0.66
Cks1bP61025 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Gm7791-201ENSMUST00000219066 539 ntBASIC10.91□□□□□ -0.66
Cks1bP61025 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.91□□□□□ -0.66
Cks1bP61025 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cks1bP61025 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.91□□□□□ -0.66
Cks1bP61025 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cks1bP61025 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1bP61025 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms