Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Cks2P56390 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cks2P56390 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cks2P56390 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cks2P56390 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cks2P56390 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cks2P56390 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cks2P56390 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cks2P56390 Gm11950-201ENSMUST00000121615 838 ntBASIC12.76□□□□□ -0.37
Cks2P56390 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.76□□□□□ -0.37
Cks2P56390 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.76□□□□□ -0.37
Cks2P56390 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.76□□□□□ -0.37
Cks2P56390 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cks2P56390 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cks2P56390 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cks2P56390 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks2P56390 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Cks2P56390 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cks2P56390 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.75□□□□□ -0.37
Cks2P56390 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Cks2P56390 Gm9172-201ENSMUST00000212092 954 ntBASIC12.75□□□□□ -0.37
Cks2P56390 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.75□□□□□ -0.37
Cks2P56390 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Cks2P56390 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cks2P56390 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.75□□□□□ -0.37
Cks2P56390 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks2P56390 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Cks2P56390 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cks2P56390 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms