Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atxn1P54254 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Atxn1P54254 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.17■□□□□ 0.02
Atxn1P54254 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atxn1P54254 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.17■□□□□ 0.02
Atxn1P54254 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.17■□□□□ 0.02
Atxn1P54254 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.16■□□□□ 0.02
Atxn1P54254 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.16■□□□□ 0.02
Atxn1P54254 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.16■□□□□ 0.02
Atxn1P54254 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atxn1P54254 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atxn1P54254 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.15■□□□□ 0.02
Atxn1P54254 Gm12151-201ENSMUST00000121374 290 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 Gm20553-201ENSMUST00000204205 844 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.15■□□□□ 0.02
Atxn1P54254 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atxn1P54254 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atxn1P54254 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.14■□□□□ 0.01
Atxn1P54254 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atxn1P54254 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.14■□□□□ 0.01
Atxn1P54254 Mir6404-201ENSMUST00000183699 94 ntBASIC15.14■□□□□ 0.01
Atxn1P54254 Gm36967-201ENSMUST00000193814 266 ntBASIC15.14■□□□□ 0.01
Atxn1P54254 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Atxn1P54254 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Gm2423-201ENSMUST00000074863 733 ntBASIC15.14■□□□□ 0.01
Atxn1P54254 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.14■□□□□ 0.01
Atxn1P54254 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Atxn1P54254 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Atxn1P54254 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Atxn1P54254 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atxn1P54254 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.13■□□□□ 0.01
Atxn1P54254 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.13■□□□□ 0.01
Atxn1P54254 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.13■□□□□ 0.01
Atxn1P54254 Gm10253-201ENSMUST00000194270 940 ntBASIC15.13■□□□□ 0.01
Atxn1P54254 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms