Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Sox18P43680 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox18P43680 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox18P43680 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox18P43680 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox18P43680 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox18P43680 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox18P43680 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sox18P43680 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox18P43680 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.63□□□□□ -0.07
Sox18P43680 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.63□□□□□ -0.07
Sox18P43680 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox18P43680 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox18P43680 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox18P43680 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.62□□□□□ -0.07
Sox18P43680 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sox18P43680 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Gm13453-201ENSMUST00000118708 357 ntBASIC14.62□□□□□ -0.07
Sox18P43680 Gm16198-201ENSMUST00000118766 670 ntBASIC14.62□□□□□ -0.07
Sox18P43680 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.62□□□□□ -0.07
Sox18P43680 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox18P43680 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox18P43680 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.62□□□□□ -0.07
Sox18P43680 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.62□□□□□ -0.07
Sox18P43680 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sox18P43680 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sox18P43680 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sox18P43680 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox18P43680 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.61□□□□□ -0.07
Sox18P43680 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Gm12490-201ENSMUST00000120255 560 ntBASIC14.61□□□□□ -0.07
Sox18P43680 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.61□□□□□ -0.07
Sox18P43680 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.61□□□□□ -0.07
Sox18P43680 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox18P43680 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.61□□□□□ -0.07
Sox18P43680 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox18P43680 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms