Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp3P28862 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp3P28862 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Mmp3P28862 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Mmp3P28862 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Mmp3P28862 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Gm6973-201ENSMUST00000117080 721 ntBASIC16.29■□□□□ 0.2
Mmp3P28862 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Mmp3P28862 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Mmp3P28862 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
Mmp3P28862 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.29■□□□□ 0.2
Mmp3P28862 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.29■□□□□ 0.2
Mmp3P28862 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp3P28862 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.29■□□□□ 0.2
Mmp3P28862 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Mmp3P28862 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Mmp3P28862 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Prob1-201ENSMUST00000097619 3021 ntBASIC16.28■□□□□ 0.2
Mmp3P28862 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.28■□□□□ 0.2
Mmp3P28862 Gm16026-204ENSMUST00000162652 683 ntBASIC16.28■□□□□ 0.2
Mmp3P28862 Gm25948-201ENSMUST00000175334 112 ntBASIC16.28■□□□□ 0.2
Mmp3P28862 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.28■□□□□ 0.2
Mmp3P28862 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.28■□□□□ 0.2
Mmp3P28862 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.28■□□□□ 0.2
Mmp3P28862 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.28■□□□□ 0.2
Mmp3P28862 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp3P28862 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.27■□□□□ 0.2
Mmp3P28862 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.27■□□□□ 0.2
Mmp3P28862 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Mmp3P28862 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Mmp3P28862 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.27■□□□□ 0.2
Mmp3P28862 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.27■□□□□ 0.2
Mmp3P28862 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Mmp3P28862 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.27■□□□□ 0.2
Mmp3P28862 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp3P28862 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Mmp3P28862 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Mmp3P28862 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp3P28862 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp3P28862 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp3P28862 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.26■□□□□ 0.19
Mmp3P28862 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
Mmp3P28862 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
Mmp3P28862 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.26■□□□□ 0.19
Mmp3P28862 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Mmp3P28862 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms