Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.67□□□□□ -0.38
Cxcl1P12850 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl1P12850 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.67□□□□□ -0.38
Cxcl1P12850 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cxcl1P12850 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl1P12850 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.66□□□□□ -0.38
Cxcl1P12850 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm11950-201ENSMUST00000121615 838 ntBASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm6345-202ENSMUST00000180900 204 ntBASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.66□□□□□ -0.38
Cxcl1P12850 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.66□□□□□ -0.38
Cxcl1P12850 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Cxcl1P12850 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl1P12850 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcl1P12850 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.65□□□□□ -0.38
Cxcl1P12850 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcl1P12850 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl1P12850 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl1P12850 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.65□□□□□ -0.38
Cxcl1P12850 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl1P12850 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl1P12850 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl1P12850 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl1P12850 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl1P12850 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Cxcl1P12850 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.65□□□□□ -0.39
Cxcl1P12850 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl1P12850 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms