Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Dancr-204ENSMUST00000132389 2347 ntBASIC15.53■□□□□ 0.08
Rc3h2P0C090 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Gm16198-201ENSMUST00000118766 670 ntBASIC15.53■□□□□ 0.08
Rc3h2P0C090 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.53■□□□□ 0.08
Rc3h2P0C090 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h2P0C090 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.52■□□□□ 0.08
Rc3h2P0C090 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Rpph1-201ENSMUST00000175096 319 ntBASIC15.52■□□□□ 0.08
Rc3h2P0C090 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rc3h2P0C090 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Rc3h2P0C090 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.51■□□□□ 0.07
Rc3h2P0C090 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h2P0C090 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.5■□□□□ 0.07
Rc3h2P0C090 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Gm15920-201ENSMUST00000118998 402 ntBASIC15.5■□□□□ 0.07
Rc3h2P0C090 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.5■□□□□ 0.07
Rc3h2P0C090 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.5■□□□□ 0.07
Rc3h2P0C090 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.5■□□□□ 0.07
Rc3h2P0C090 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h2P0C090 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms