Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ifna1P01572 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ifna1P01572 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ifna1P01572 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ifna1P01572 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ifna1P01572 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ifna1P01572 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ifna1P01572 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ifna1P01572 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ifna1P01572 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ifna1P01572 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ifna1P01572 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ifna1P01572 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.89□□□□□ -0.35
Ifna1P01572 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ifna1P01572 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.89□□□□□ -0.35
Ifna1P01572 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.89□□□□□ -0.35
Ifna1P01572 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ifna1P01572 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ifna1P01572 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.89□□□□□ -0.35
Ifna1P01572 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ifna1P01572 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Ifna1P01572 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.88□□□□□ -0.35
Ifna1P01572 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ifna1P01572 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.88□□□□□ -0.35
Ifna1P01572 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.88□□□□□ -0.35
Ifna1P01572 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.88□□□□□ -0.35
Ifna1P01572 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ifna1P01572 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ifna1P01572 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms