Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vti1aO89116 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vti1aO89116 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.46■□□□□ 0.23
Vti1aO89116 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vti1aO89116 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vti1aO89116 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vti1aO89116 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Gm11025-201ENSMUST00000140773 466 ntBASIC16.46■□□□□ 0.23
Vti1aO89116 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.46■□□□□ 0.23
Vti1aO89116 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.46■□□□□ 0.23
Vti1aO89116 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.46■□□□□ 0.23
Vti1aO89116 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Vti1aO89116 Asic1-205ENSMUST00000228185 1818 ntBASIC16.46■□□□□ 0.23
Vti1aO89116 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.46■□□□□ 0.23
Vti1aO89116 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vti1aO89116 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.46■□□□□ 0.23
Vti1aO89116 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vti1aO89116 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vti1aO89116 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vti1aO89116 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vti1aO89116 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vti1aO89116 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vti1aO89116 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Vti1aO89116 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vti1aO89116 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Vti1aO89116 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Vti1aO89116 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.45■□□□□ 0.22
Vti1aO89116 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.45■□□□□ 0.22
Vti1aO89116 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vti1aO89116 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vti1aO89116 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vti1aO89116 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Gm18489-201ENSMUST00000172565 551 ntBASIC16.44■□□□□ 0.22
Vti1aO89116 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms