Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Efnb3O35393 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Gm9013-201ENSMUST00000132939 882 ntBASIC12.1□□□□□ -0.47
Efnb3O35393 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Efnb3O35393 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Efnb3O35393 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Efnb3O35393 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Efnb3O35393 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.09□□□□□ -0.47
Efnb3O35393 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Efnb3O35393 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Efnb3O35393 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Gm25016-201ENSMUST00000158399 131 ntBASIC12.09□□□□□ -0.47
Efnb3O35393 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Gm6659-201ENSMUST00000174752 547 ntBASIC12.09□□□□□ -0.47
Efnb3O35393 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.09□□□□□ -0.47
Efnb3O35393 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.09□□□□□ -0.47
Efnb3O35393 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Efnb3O35393 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Efnb3O35393 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Efnb3O35393 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Efnb3O35393 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.09□□□□□ -0.47
Efnb3O35393 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Efnb3O35393 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Efnb3O35393 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Efnb3O35393 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.08□□□□□ -0.48
Efnb3O35393 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.08□□□□□ -0.48
Efnb3O35393 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.08□□□□□ -0.48
Efnb3O35393 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.08□□□□□ -0.48
Efnb3O35393 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Efnb3O35393 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.08□□□□□ -0.48
Efnb3O35393 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.08□□□□□ -0.48
Efnb3O35393 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Efnb3O35393 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Efnb3O35393 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms