Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.54□□□□□ -0.08
ClockO08785 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.54□□□□□ -0.08
ClockO08785 Gm44430-201ENSMUST00000203376 995 ntBASIC14.54□□□□□ -0.08
ClockO08785 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ClockO08785 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.54□□□□□ -0.08
ClockO08785 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
ClockO08785 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClockO08785 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClockO08785 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ClockO08785 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.53□□□□□ -0.08
ClockO08785 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ClockO08785 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClockO08785 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ClockO08785 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.53□□□□□ -0.08
ClockO08785 Gm13436-201ENSMUST00000120418 567 ntBASIC14.53□□□□□ -0.08
ClockO08785 Gm10052-201ENSMUST00000168019 960 ntBASIC14.53□□□□□ -0.08
ClockO08785 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ClockO08785 Gm7729-201ENSMUST00000050143 801 ntBASIC14.53□□□□□ -0.08
ClockO08785 Gm7367-201ENSMUST00000057611 492 ntBASIC14.53□□□□□ -0.08
ClockO08785 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClockO08785 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.52□□□□□ -0.08
ClockO08785 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ClockO08785 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
ClockO08785 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClockO08785 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
ClockO08785 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.52□□□□□ -0.09
ClockO08785 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.52□□□□□ -0.09
ClockO08785 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ClockO08785 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ClockO08785 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClockO08785 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.51□□□□□ -0.09
ClockO08785 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ClockO08785 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ClockO08785 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
ClockO08785 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.51□□□□□ -0.09
ClockO08785 Mir1668-201ENSMUST00000184114 107 ntBASIC14.51□□□□□ -0.09
ClockO08785 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.51□□□□□ -0.09
ClockO08785 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.51□□□□□ -0.09
ClockO08785 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.51□□□□□ -0.09
ClockO08785 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClockO08785 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ClockO08785 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.51□□□□□ -0.09
ClockO08785 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms