Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11bO08712 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm8318-201ENSMUST00000182954 872 ntBASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11bO08712 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11bO08712 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnfrsf11bO08712 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.51■□□□□ 0.07
Tnfrsf11bO08712 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms