Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm8825-201ENSMUST00000182565 998 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm4518-201ENSMUST00000182638 718 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh1F7BJK1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gm15794-201ENSMUST00000120182 631 ntBASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms