Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3854A0A1B0GSS6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm5779-201ENSMUST00000218467 910 ntBASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3854A0A1B0GSS6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm6973-201ENSMUST00000117080 721 ntBASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm27622-201ENSMUST00000183779 60 ntBASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3854A0A1B0GSS6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3854A0A1B0GSS6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm25287-201ENSMUST00000103846 110 ntBASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Gm22918-201ENSMUST00000103855 110 ntBASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm3854A0A1B0GSS6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms