Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Gm15165-201ENSMUST00000118140 502 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Gm27867-201ENSMUST00000184778 125 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.54□□□□□ -0.4
Trav18A0A075B656 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.54□□□□□ -0.4
Trav18A0A075B656 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav18A0A075B656 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Efs-202ENSMUST00000227037 2540 ntBASIC12.53□□□□□ -0.4
Trav18A0A075B656 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gm19164-201ENSMUST00000210667 640 ntBASIC12.53□□□□□ -0.4
Trav18A0A075B656 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.53□□□□□ -0.4
Trav18A0A075B656 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav18A0A075B656 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms