Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm6257-201ENSMUST00000163864 910 ntBASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Trmt13-210ENSMUST00000198454 880 ntBASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav16d-dv11A0A075B617 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm37179-201ENSMUST00000194862 823 ntBASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms