Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cr1Q9Z0D9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm37055-201ENSMUST00000191866 133 ntBASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cr1Q9Z0D9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm22240-201ENSMUST00000175225 82 ntBASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cr1Q9Z0D9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms