Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps29Q9QZ88 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.67□□□□□ -0.06
Vps29Q9QZ88 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps29Q9QZ88 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Gm28033-201ENSMUST00000184224 96 ntBASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps29Q9QZ88 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps29Q9QZ88 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms