Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm6623-201ENSMUST00000173570 544 ntBASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf13bQ9ET35 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm8825-201ENSMUST00000182565 998 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm4518-201ENSMUST00000182638 718 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms