Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmg20aQ9DC33 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmg20aQ9DC33 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Gm18958-201ENSMUST00000174258 762 ntBASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Gm38027-201ENSMUST00000192315 235 ntBASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmg20aQ9DC33 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Mir1199-201ENSMUST00000117015 119 ntBASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmg20aQ9DC33 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Gm32996-201ENSMUST00000199828 1447 ntBASIC14□□□□□ -0.17
Hmg20aQ9DC33 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmg20aQ9DC33 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms