Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Gm18958-201ENSMUST00000174258 762 ntBASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Mbd3l1Q9D9H3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mbd3l1Q9D9H3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms