Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.81□□□□□ -0.36
ShpkQ9D5J6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Gm29707-201ENSMUST00000196325 491 ntBASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShpkQ9D5J6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShpkQ9D5J6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms