Protein–RNA interactions for Protein: Q9D3H9

5530401A14Rik, RIKEN cDNA 5530401A14 gene, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530401A14RikQ9D3H9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
5530401A14RikQ9D3H9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
5530401A14RikQ9D3H9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
5530401A14RikQ9D3H9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
5530401A14RikQ9D3H9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms