Protein–RNA interactions for Protein: Q91ZW3

Smarca5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

Known RBP Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5Q91ZW3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarca5Q91ZW3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.79■□□□□ 0.6
Smarca5Q91ZW3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarca5Q91ZW3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Gm37153-201ENSMUST00000193637 231 ntBASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Gm9682-201ENSMUST00000197505 556 ntBASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarca5Q91ZW3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarca5Q91ZW3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarca5Q91ZW3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarca5Q91ZW3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarca5Q91ZW3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarca5Q91ZW3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Gm4899-201ENSMUST00000178708 719 ntBASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarca5Q91ZW3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Gm13036-201ENSMUST00000117799 748 ntBASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 AV026068-213ENSMUST00000223675 1171 ntBASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smarca5Q91ZW3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarca5Q91ZW3 Gm27628-201ENSMUST00000184911 107 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms