Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 BC037039-201ENSMUST00000192003 2205 ntBASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb4Q91XZ6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Sybu-209ENSMUST00000228639 4113 ntBASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Gm15165-201ENSMUST00000118140 502 ntBASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Gm25745-201ENSMUST00000174945 133 ntBASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb4Q91XZ6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms