Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Gm18032-201ENSMUST00000222541 538 ntBASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Gm9987-201ENSMUST00000069768 567 ntBASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh18Q8VHR0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh18Q8VHR0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Gm10013-201ENSMUST00000106074 672 ntBASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms