Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab40cQ8VHQ4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab40cQ8VHQ4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab40cQ8VHQ4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab40cQ8VHQ4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms