Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rtn4rl1Q8K0S5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4rl1Q8K0S5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm25144-201ENSMUST00000179561 110 ntBASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm25352-201ENSMUST00000179815 110 ntBASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm9063-201ENSMUST00000223299 582 ntBASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms