Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Gm6659-201ENSMUST00000174752 547 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Gm7506-201ENSMUST00000207758 815 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Grk6-207ENSMUST00000225925 2769 ntBASIC16.74■□□□□ 0.27
Sox30Q8CGW4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox30Q8CGW4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox30Q8CGW4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms