Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm28Q8CGC6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Dancr-204ENSMUST00000132389 2347 ntBASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbm28Q8CGC6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbm28Q8CGC6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rbm28Q8CGC6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbm28Q8CGC6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbm28Q8CGC6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 563.9 ms