Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gm9013-201ENSMUST00000132939 882 ntBASIC16.29■□□□□ 0.2
Trim6Q8BGE7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gm6623-201ENSMUST00000173570 544 ntBASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.29■□□□□ 0.2
Trim6Q8BGE7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim6Q8BGE7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim6Q8BGE7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.27■□□□□ 0.2
Trim6Q8BGE7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim6Q8BGE7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim6Q8BGE7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim6Q8BGE7 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.27■□□□□ 0.19
Trim6Q8BGE7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim6Q8BGE7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim6Q8BGE7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms