Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm44872-201ENSMUST00000207864 420 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Gm12008-201ENSMUST00000117791 755 ntBASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Gm13616-201ENSMUST00000120600 222 ntBASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1l1Q6T3U4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Gm13365-201ENSMUST00000121188 973 ntBASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1l1Q6T3U4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Npc1l1Q6T3U4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.27■□□□□ 0.51
Npc1l1Q6T3U4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Npc1l1Q6T3U4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Npc1l1Q6T3U4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Npc1l1Q6T3U4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Gm2272-201ENSMUST00000194903 582 ntBASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1l1Q6T3U4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm44335-201ENSMUST00000196879 141 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm44297-201ENSMUST00000198304 141 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm44346-201ENSMUST00000198851 141 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms