Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snrnp40Q6PE01 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gm15483-201ENSMUST00000120338 456 ntBASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snrnp40Q6PE01 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm25144-201ENSMUST00000179561 110 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm25352-201ENSMUST00000179815 110 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Gm18049-201ENSMUST00000208909 581 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snrnp40Q6PE01 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Snrnp40Q6PE01 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Snrnp40Q6PE01 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms