Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Gm27704-201ENSMUST00000185094 107 ntBASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga7Q6DD96 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga7Q6DD96 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Gm15165-201ENSMUST00000118140 502 ntBASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga7Q6DD96 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Gm25745-201ENSMUST00000174945 133 ntBASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Gm42790-201ENSMUST00000201268 969 ntBASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms