Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.34■□□□□ 0.69
Clcn1Q64347 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn1Q64347 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.34■□□□□ 0.69
Clcn1Q64347 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn1Q64347 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.34■□□□□ 0.69
Clcn1Q64347 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clcn1Q64347 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.34■□□□□ 0.69
Clcn1Q64347 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clcn1Q64347 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn1Q64347 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn1Q64347 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.33■□□□□ 0.69
Clcn1Q64347 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn1Q64347 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn1Q64347 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Mir7023-201ENSMUST00000185093 64 ntBASIC19.33■□□□□ 0.68
Clcn1Q64347 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC19.33■□□□□ 0.68
Clcn1Q64347 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.33■□□□□ 0.68
Clcn1Q64347 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.33■□□□□ 0.68
Clcn1Q64347 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clcn1Q64347 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn1Q64347 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.33■□□□□ 0.68
Clcn1Q64347 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.32■□□□□ 0.68
Clcn1Q64347 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Clcn1Q64347 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
Clcn1Q64347 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcn1Q64347 Gm5186-201ENSMUST00000218781 920 ntBASIC19.32■□□□□ 0.68
Clcn1Q64347 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.32■□□□□ 0.68
Clcn1Q64347 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcn1Q64347 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.32■□□□□ 0.68
Clcn1Q64347 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn1Q64347 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.31■□□□□ 0.68
Clcn1Q64347 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Gm5779-201ENSMUST00000218467 910 ntBASIC19.31■□□□□ 0.68
Clcn1Q64347 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.31■□□□□ 0.68
Clcn1Q64347 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clcn1Q64347 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn1Q64347 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms