Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six1Q62231 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Six1Q62231 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Gm12134-201ENSMUST00000122109 520 ntBASIC15.71■□□□□ 0.11
Six1Q62231 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.71■□□□□ 0.11
Six1Q62231 Gm33142-201ENSMUST00000193913 867 ntBASIC15.71■□□□□ 0.11
Six1Q62231 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.71■□□□□ 0.11
Six1Q62231 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Six1Q62231 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six1Q62231 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Six1Q62231 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six1Q62231 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six1Q62231 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Six1Q62231 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Six1Q62231 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six1Q62231 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six1Q62231 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Six1Q62231 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.7■□□□□ 0.1
Six1Q62231 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Six1Q62231 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.7■□□□□ 0.1
Six1Q62231 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.7■□□□□ 0.1
Six1Q62231 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Gm27646-201ENSMUST00000183989 110 ntBASIC15.7■□□□□ 0.1
Six1Q62231 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.7■□□□□ 0.1
Six1Q62231 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Six1Q62231 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six1Q62231 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.7■□□□□ 0.1
Six1Q62231 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Six1Q62231 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six1Q62231 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.69■□□□□ 0.1
Six1Q62231 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.69■□□□□ 0.1
Six1Q62231 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six1Q62231 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.69■□□□□ 0.1
Six1Q62231 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Six1Q62231 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Six1Q62231 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.69■□□□□ 0.1
Six1Q62231 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.69■□□□□ 0.1
Six1Q62231 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.69■□□□□ 0.1
Six1Q62231 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.69■□□□□ 0.1
Six1Q62231 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.69■□□□□ 0.1
Six1Q62231 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six1Q62231 Carlr-201ENSMUST00000181515 2574 ntBASIC15.69■□□□□ 0.1
Six1Q62231 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six1Q62231 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Six1Q62231 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms