Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox17Q61473 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Sox17Q61473 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Sox17Q61473 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sox17Q61473 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.39□□□□□ -0.11
Sox17Q61473 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox17Q61473 Gm13559-201ENSMUST00000120476 863 ntBASIC14.39□□□□□ -0.11
Sox17Q61473 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.39□□□□□ -0.11
Sox17Q61473 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox17Q61473 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Sox17Q61473 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox17Q61473 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Sox17Q61473 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox17Q61473 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox17Q61473 Gm10812-201ENSMUST00000099864 546 ntBASIC14.38□□□□□ -0.11
Sox17Q61473 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sox17Q61473 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sox17Q61473 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox17Q61473 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Gm7889-201ENSMUST00000185591 958 ntBASIC14.37□□□□□ -0.11
Sox17Q61473 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.37□□□□□ -0.11
Sox17Q61473 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.37□□□□□ -0.11
Sox17Q61473 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Sox17Q61473 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.37□□□□□ -0.11
Sox17Q61473 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.37□□□□□ -0.11
Sox17Q61473 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Sox17Q61473 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox17Q61473 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox17Q61473 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sox17Q61473 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.36□□□□□ -0.11
Sox17Q61473 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms