Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col12a1Q60847 Gm10766-202ENSMUST00000194123 606 ntBASIC14.94□□□□□ -0.02
Col12a1Q60847 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.94□□□□□ -0.02
Col12a1Q60847 Gm9797-201ENSMUST00000052902 613 ntBASIC14.94□□□□□ -0.02
Col12a1Q60847 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.94□□□□□ -0.02
Col12a1Q60847 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col12a1Q60847 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col12a1Q60847 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.93□□□□□ -0.02
Col12a1Q60847 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm3436-201ENSMUST00000179930 840 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Dupd1-202ENSMUST00000224735 548 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm27892-201ENSMUST00000185017 106 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Olfr582-201ENSMUST00000098212 960 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.92□□□□□ -0.02
Col12a1Q60847 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col12a1Q60847 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Col12a1Q60847 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Col12a1Q60847 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.91□□□□□ -0.02
Col12a1Q60847 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.91□□□□□ -0.02
Col12a1Q60847 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.91□□□□□ -0.02
Col12a1Q60847 Gm26461-201ENSMUST00000175064 290 ntBASIC14.91□□□□□ -0.02
Col12a1Q60847 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.91□□□□□ -0.02
Col12a1Q60847 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.91□□□□□ -0.02
Col12a1Q60847 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col12a1Q60847 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms