Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atp13a3Q5XF89 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Gm16026-204ENSMUST00000162652 683 ntBASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Mir6956-201ENSMUST00000183598 62 ntBASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atp13a3Q5XF89 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Gm6973-201ENSMUST00000117080 721 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Gm44872-201ENSMUST00000207864 420 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp13a3Q5XF89 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Prob1-201ENSMUST00000097619 3021 ntBASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp13a3Q5XF89 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atp13a3Q5XF89 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Atp13a3Q5XF89 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atp13a3Q5XF89 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Atp13a3Q5XF89 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atp13a3Q5XF89 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms