Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm12933-201ENSMUST00000120203 872 ntBASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm6257-201ENSMUST00000163864 910 ntBASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7d-4Q5R1H9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav7d-4Q5R1H9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Gm11539-201ENSMUST00000119837 557 ntBASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms