Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Gm27533-201ENSMUST00000183800 152 ntBASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Gm7775-201ENSMUST00000218871 853 ntBASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8d-2Q5R1B6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8d-2Q5R1B6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8d-2Q5R1B6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8d-2Q5R1B6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Gm43433-201ENSMUST00000196573 481 ntBASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-2Q5R1B6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-2Q5R1B6 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms